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Intron Name: Anas_platyrhynchos_platyrhynchos_3_13293622_13294637_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13293622 - 13294637

Intron Length:

1016

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTAATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

TTTGTTTTAATA

Flanking Amino Acid:

YIHTEHGGSQARFLLSKVNP

Intron Amino Acid Position:

763

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

0.68

0.9

77.6

35.5

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

71.7

0.68

1.3

33.3

Associated Gene:

Gene:

SEC23B

Ensembl Gene ID:

ENSAPLG00000004406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027025

13280477 - 13294874

14398

ENSAPLT00000004619

13280477 - 13295622

15146