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Intron Name: Anas_platyrhynchos_platyrhynchos_3_13298046_13302038_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13298046 - 13302038

Intron Length:

3993

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAA|GCACCACCA

5'SS Class:

weak_major

3'SS Sequence:

AAAGGGAGAAGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

TTCCTGATAATC

Flanking Amino Acid:

RTFFMLVTEQSPHQLYKWSL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.6

0.16

1.3

49.6

40.5

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

36.9

-0.7

1.6

21.6

Minor 5ss

28.1

-2.5

4.1

39.7

Minor BPS

45.3

-0.3

2.2

59.86

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029844

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030896

13297118 - 13302254

5137