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Intron Name: Anas_platyrhynchos_platyrhynchos_3_13520936_13526424_F

Intron Information:

Intron Rank:

150203

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13520936 - 13526424

Intron Length:

5489

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTACA

5'SS Class:

strong_major

3'SS Sequence:

AACACTGCTTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGTTCAT

U12 Branch Point Sequence:

TCTTCTTTTACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.1

80.7

33.8

Major BPS

0.65

1.1

77.4

37.3

Major PPT

59.8

0.22

55.2

40.3

Minor 5ss

41.6

-0.9

2.5

52.6

Minor BPS

71.1

0.65

1.6

78.32

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030731

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022693

13520794 - 13537055

16262