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Intron Name: Anas_platyrhynchos_platyrhynchos_3_13562962_13580350_F

Intron Information:

Intron Rank:

149532

Intron Class:

major

Intron Phase:

Intron Coordinates:

13562962 - 13580350

Intron Length:

17389

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGACTT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTGCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

AAGGATTTGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

0.8

80.6

33.8

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

83.2

0.75

0.8

80.3

31.8

Minor 5ss

32.5

-2

3.3

47.4

Minor BPS

47.3

-0.1

1.5

58.18

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030470

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024530

13562116 - 13582267

20152