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Intron Name: Anas_platyrhynchos_platyrhynchos_3_1359757_1402492_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1359757 - 1402492

Intron Length:

42736

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGAC

5'SS Class:

strong_major

3'SS Sequence:

ACCCCCTCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

CCTGTTTCACCC

Flanking Amino Acid:

LLEVDAIVNAGRV*

Intron Amino Acid Position:

307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.8

34.3

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

71.7

0.49

0.8

61.7

34.2

Minor 5ss

31.6

-2.1

3.4

42.4

45.1

Minor BPS

43.3

-0.5

1.8

48.67

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012919

1335164 - 1402503

67340