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Intron Name: Anas_platyrhynchos_platyrhynchos_3_13615595_13624585_F

Intron Information:

Intron Rank:

142092

Intron Class:

major

Intron Phase:

Intron Coordinates:

13615595 - 13624585

Intron Length:

8991

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTATATTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TCTTTCTTACAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

82.1

24.6

Major BPS

79.2

0.73

75.3

39.4

Major PPT

75.5

0.57

1.1

75.9

36.8

Minor 5ss

27.3

-2.6

2.7

30.6

42.8

Minor BPS

61.2

0.35

1.7

71.75

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026499

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033817

13614968 - 13625645

10678