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Intron Name: Anas_platyrhynchos_platyrhynchos_3_13638129_13638838_R

Intron Information:

Intron Rank:

145719

Intron Class:

major

Intron Phase:

Intron Coordinates:

13638129 - 13638838

Intron Length:

710

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTGTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TAATACATACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

71.1

32.5

Major BPS

77.9

0.69

0.8

75.9

Major PPT

72.7

0.51

0.9

65.1

41.2

Minor 5ss

30.1

-2.3

3.3

39.5

45.9

Minor BPS

47.3

-0.1

68.31

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025797

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037343

13616662 - 13642407

25746

ENSAPLT00000035098

13616662 - 13693779

77118