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Intron Name: Anas_platyrhynchos_platyrhynchos_3_13664837_13680786_F

Intron Information:

Intron Rank:

128916

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13664837 - 13680786

Intron Length:

15950

Sequence Information:

Terminal Dinucleotides:

GT-TA

5'SS Sequence:

GTG|GTAACTTGC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTCTA|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTGCAT

U12 Branch Point Sequence:

TGCCAGTGAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.2

65.8

Major BPS

59.8

0.25

1.5

71.4

45.1

Major PPT

34.3

-0.9

4.4

84.6

35.9

Minor 5ss

46.2

-0.4

2.6

58.8

40.9

Minor BPS

40.6

-0.6

2.2

57.81

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019366

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046139

13664578 - 13681633

17056