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Intron Name: Anas_platyrhynchos_platyrhynchos_3_13672714_13676802_F

Intron Information:

Intron Rank:

123949

Intron Class:

major

Intron Phase:

Intron Coordinates:

13672714 - 13676802

Intron Length:

4089

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCCCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TCACCGATAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

72.7

44.5

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

80.3

0.68

0.7

74.1

31.1

Minor 5ss

36.4

-1.5

3.3

47.2

Minor BPS

47.4

-0.2

2.3

62.8

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047063

13661947 - 13677502

15556