Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_13785578_13787366_F

Intron Information:

Intron Rank:

126448

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13785578 - 13787366

Intron Length:

1789

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

CCATGTGGCACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTCCAT

U12 Branch Point Sequence:

GCTTCCTCTACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

77.3

32.8

Major BPS

0.37

1.3

76.1

Major PPT

58.7

0.2

1.1

41.5

Minor 5ss

37.2

-1.4

2.8

47.9

41.8

Minor BPS

60.2

0.4

1.9

77.51

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018154

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031764

13785523 - 13788034

2512