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Intron Name: Anas_platyrhynchos_platyrhynchos_3_13787493_13814534_F

Intron Information:

Intron Rank:

126445

Intron Class:

major

Intron Phase:

Intron Coordinates:

13787493 - 13814534

Intron Length:

27042

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTTTGTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

ATATTCTTGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

77.5

32.8

Major BPS

74.5

0.61

79.6

29.1

Major PPT

84.1

0.77

0.9

85.1

34.9

Minor 5ss

26.6

-2.7

31.8

42.6

Minor BPS

72.4

0.79

1.1

81.38

33.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018154

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029831

13787279 - 13819351

32073