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Intron Name: Anas_platyrhynchos_platyrhynchos_3_14452365_14457189_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14452365 - 14457189

Intron Length:

4825

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCCTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TTTTCCTTCAAG

Flanking Amino Acid:

DCSEEDNYVEGLAHLMMGDQ

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

84.8

0.86

85.7

34.9

Major PPT

74.8

0.56

72.4

38.1

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

66.9

0.39

76.73

40.6

Associated Gene:

Gene:

NRXN1

Ensembl Gene ID:

ENSAPLG00000003929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024029

14387103 - 15087266

700164

ENSAPLT00000019780

14387103 - 15086872

699770

ENSAPLT00000047753

14387103 - 15086872

699770

ENSAPLT00000017983

14387103 - 15086872

699770

ENSAPLT00000045928

14387103 - 15086872

699770

ENSAPLT00000043543

14387103 - 15086872

699770