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Intron Name: Anas_platyrhynchos_platyrhynchos_3_14457220_14458018_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

14457220 - 14458018

Intron Length:

799

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGGCT

5'SS Class:

strong_major

3'SS Sequence:

ACCAAATCCATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

ATTTCACCAAAT

Flanking Amino Acid:

GLAHLMMGDQGKSKGKEEYI

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

72.2

37.3

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

55.1

0.12

0.9

46.8

34.6

Minor 5ss

37.9

-1.4

3.6

56.2

48.2

Minor BPS

47.4

-0.1

2.2

74.83

40.8

Associated Gene:

Gene:

NRXN1

Ensembl Gene ID:

ENSAPLG00000003929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019780

14387103 - 15086872

699770

ENSAPLT00000017983

14387103 - 15086872

699770

ENSAPLT00000004036

14387103 - 15086872

699770

ENSAPLT00000043543

14387103 - 15086872

699770