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Intron Name: Anas_platyrhynchos_platyrhynchos_3_14620913_14622945_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14620913 - 14622945

Intron Length:

2033

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAGTA

5'SS Class:

major

3'SS Sequence:

CTTCTCCACAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CAGTTTTTAATT

Flanking Amino Acid:

DVKVTRNLRQHSGIGHAMVN

Intron Amino Acid Position:

362

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

1.1

75.2

35.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.29

63.7

30.7

Minor 5ss

39.6

-1.2

3.5

48.2

Minor BPS

66.1

0.58

1.2

71.78

40.2

Associated Gene:

Gene:

NRXN1

Ensembl Gene ID:

ENSAPLG00000003929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019780

14387103 - 15086872

699770

ENSAPLT00000017983

14387103 - 15086872

699770

ENSAPLT00000047753

14387103 - 15086872

699770

ENSAPLT00000004036

14387103 - 15086872

699770

ENSAPLT00000043543

14387103 - 15086872

699770

ENSAPLT00000024029

14387103 - 15087266

700164