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Intron Name: Anas_platyrhynchos_platyrhynchos_3_14624080_14666733_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14624080 - 14666733

Intron Length:

42654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATATC

5'SS Class:

strong_major

3'SS Sequence:

ACTTTGCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAA

U12 Branch Point Sequence:

GTCCCCTTAGTA

Flanking Amino Acid:

SNNFMGCLKEVVYKNNDVRL

Intron Amino Acid Position:

431

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

87.7

26.2

Major BPS

74.2

0.6

0.9

75.7

Major PPT

80.1

0.68

0.9

73.4

36.4

Minor 5ss

39.6

-1.2

2.9

43.3

Minor BPS

0.28

1.6

65.68

40.9

Associated Gene:

Gene:

NRXN1

Ensembl Gene ID:

ENSAPLG00000003929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017983

14387103 - 15086872

699770

ENSAPLT00000045928

14387103 - 15086872

699770

ENSAPLT00000004036

14387103 - 15086872

699770

ENSAPLT00000043543

14387103 - 15086872

699770

ENSAPLT00000024029

14387103 - 15087266

700164

ENSAPLT00000019780

14387103 - 15086872

699770

ENSAPLT00000047753

14387103 - 15086872

699770