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Intron Name: Anas_platyrhynchos_platyrhynchos_3_14667173_14678777_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14667173 - 14678777

Intron Length:

11605

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

AATTTCTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

AAAACCTTAAAT

Flanking Amino Acid:

HVDFQRDGRSGTISVNTLRT

Intron Amino Acid Position:

577

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

84.4

0.85

1.1

34.5

Major PPT

80.3

0.68

0.8

77.8

35.6

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

66.5

0.6

1.4

75.5

39.9

Associated Gene:

Gene:

NRXN1

Ensembl Gene ID:

ENSAPLG00000003929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024029

14387103 - 15087266

700164

ENSAPLT00000019780

14387103 - 15086872

699770

ENSAPLT00000047753

14387103 - 15086872

699770

ENSAPLT00000017983

14387103 - 15086872

699770

ENSAPLT00000045928

14387103 - 15086872

699770

ENSAPLT00000004036

14387103 - 15086872

699770

ENSAPLT00000043543

14387103 - 15086872

699770