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Intron Name: Anas_platyrhynchos_platyrhynchos_3_14685871_14688172_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14685871 - 14688172

Intron Length:

2302

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAACAAAC

5'SS Class:

major

3'SS Sequence:

CTTCCCCATCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATCTATT

Flanking Amino Acid:

AGRVKLTVNLDCIRINCNSS

Intron Amino Acid Position:

773

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

75.1

35.1

Major BPS

100

1.24

0.5

100

Major PPT

70.9

0.47

0.8

62.9

33.4

Minor 5ss

39.3

-1.2

2.9

51.9

44.9

Minor BPS

53.4

0.19

2.1

81.8

39.4

Associated Gene:

Gene:

NRXN1

Ensembl Gene ID:

ENSAPLG00000003929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024029

14387103 - 15087266

700164

ENSAPLT00000019780

14387103 - 15086872

699770

ENSAPLT00000017983

14387103 - 15086872

699770

ENSAPLT00000047753

14387103 - 15086872

699770

ENSAPLT00000004036

14387103 - 15086872

699770

ENSAPLT00000045928

14387103 - 15086872

699770