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Intron Name: Anas_platyrhynchos_platyrhynchos_3_14872283_14970746_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14872283 - 14970746

Intron Length:

98464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTAATATGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTTTTAATA

Flanking Amino Acid:

GLGDYLELHIHQGKIGVKFN

Intron Amino Acid Position:

1173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

85.6

30.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.1

0.68

0.9

74.8

38.9

Minor 5ss

44.2

-0.6

2.9

66.4

38.5

Minor BPS

77.8

0.87

80.84

27.9

Associated Gene:

Gene:

NRXN1

Ensembl Gene ID:

ENSAPLG00000003929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017983

14387103 - 15086872

699770

ENSAPLT00000043543

14387103 - 15086872

699770

ENSAPLT00000004036

14387103 - 15086872

699770

ENSAPLT00000035018

14810289 - 15086872

276584

ENSAPLT00000024029

14387103 - 15087266

700164

ENSAPLT00000047753

14387103 - 15086872

699770

ENSAPLT00000019780

14387103 - 15086872

699770

ENSAPLT00000045928

14387103 - 15086872

699770