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Intron Name: Anas_platyrhynchos_platyrhynchos_3_14970919_14996634_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14970919 - 14996634

Intron Length:

25716

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTAAACTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

GTCTCTTTAAAC

Flanking Amino Acid:

NWPVIERYPAGNNDNERLAI

Intron Amino Acid Position:

1230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

25.6

Major BPS

89.7

0.98

0.7

89.9

Major PPT

65.1

0.34

1.1

63.8

41.4

Minor 5ss

35.3

-1.7

3.2

50.4

Minor BPS

69.4

0.59

1.4

72.23

38.8

Associated Gene:

Gene:

NRXN1

Ensembl Gene ID:

ENSAPLG00000003929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004036

14387103 - 15086872

699770

ENSAPLT00000043543

14387103 - 15086872

699770

ENSAPLT00000035018

14810289 - 15086872

276584

ENSAPLT00000024029

14387103 - 15087266

700164

ENSAPLT00000047753

14387103 - 15086872

699770

ENSAPLT00000019780

14387103 - 15086872

699770

ENSAPLT00000045928

14387103 - 15086872

699770