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Intron Name: Anas_platyrhynchos_platyrhynchos_3_14998524_15071274_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14998524 - 15071274

Intron Length:

72751

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

ATTTTCTTCACA

Flanking Amino Acid:

KAPTKEPIGQTTDDILVASA

Intron Amino Acid Position:

1367

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

1.1

42.1

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

85.6

0.8

0.7

80.5

30.9

Minor 5ss

29.9

-2.3

2.6

32.6

42.1

Minor BPS

70.7

0.65

1.7

81.19

34.3

Associated Gene:

Gene:

NRXN1

Ensembl Gene ID:

ENSAPLG00000003929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019780

14387103 - 15086872

699770

ENSAPLT00000045928

14387103 - 15086872

699770

ENSAPLT00000017983

14387103 - 15086872

699770

ENSAPLT00000043543

14387103 - 15086872

699770

ENSAPLT00000004036

14387103 - 15086872

699770

ENSAPLT00000035018

14810289 - 15086872

276584

ENSAPLT00000024029

14387103 - 15087266

700164

ENSAPLT00000047753

14387103 - 15086872

699770