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Intron Name: Anas_platyrhynchos_platyrhynchos_3_15410199_15413122_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15410199 - 15413122

Intron Length:

2924

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTAAG

5'SS Class:

major

3'SS Sequence:

TTCTCTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CATTTTTTATTT

Flanking Amino Acid:

FMGLSSESVILWLNKNGIQE

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

67.3

39.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.9

0.78

0.8

80.1

31.9

Minor 5ss

32.5

-2

2.8

43.3

43.8

Minor BPS

58.5

0.34

1.6

71.82

40.2

Associated Gene:

Gene:

FSHR

Ensembl Gene ID:

ENSAPLG00000003689

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044530

15344570 - 15426972

82403

ENSAPLT00000003803

15389797 - 15426972

37176

ENSAPLT00000045726

15270450 - 15427239

156790