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Intron Name: Anas_platyrhynchos_platyrhynchos_3_15412072_15413122_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15412072 - 15413122

Intron Length:

1051

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTGGGTCAC

5'SS Class:

major

3'SS Sequence:

TTCTCTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CATTTTTTATTT

Flanking Amino Acid:

DLSSPPQTSDKWLNKNGIQE

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

62.1

38.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.9

0.78

0.8

80.1

31.9

Minor 5ss

29.4

-2.4

3.1

34.8

35.4

Minor BPS

58.5

0.34

1.6

71.82

40.2

Associated Gene:

Gene:

FSHR

Ensembl Gene ID:

ENSAPLG00000003689

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045666

15270450 - 15427239

156790

ENSAPLT00000025949

15344570 - 15427239

82670

ENSAPLT00000023513

15344570 - 15427239

82670