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Intron Name: Anas_platyrhynchos_platyrhynchos_3_15539211_15541453_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15539211 - 15541453

Intron Length:

2243

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTGAGTAAA

5'SS Class:

major

3'SS Sequence:

TCTTAATCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTTTTCTTAATC

Flanking Amino Acid:

FQGMNNESLTLKLYKNGFED

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

72.6

33.5

Major BPS

0.92

0.9

86.2

29.1

Major PPT

81.4

0.71

0.8

78.1

Minor 5ss

32.5

-2

2.8

43.1

43.9

Minor BPS

1.14

0.8

89.76

24.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003003

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003112

15528984 - 15549359

20376

ENSAPLT00000045360

15528984 - 15549359

20376

ENSAPLT00000020794

15523751 - 15549359

25609