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Intron Name: Anas_platyrhynchos_platyrhynchos_3_15542441_15543432_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15542441 - 15543432

Intron Length:

992

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGCATC

5'SS Class:

major

3'SS Sequence:

CTCTGTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATGAAA

U12 Branch Point Sequence:

TCTGTATGAAAA

Flanking Amino Acid:

ALRGATGPDVLDISSTALES

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.1

69.5

41.3

Major BPS

57.6

0.19

1.3

67.9

36.3

Major PPT

80.7

0.69

0.8

76.2

32.4

Minor 5ss

46.9

-0.3

2.9

71.1

38.9

Minor BPS

-0.3

1.8

58.16

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003003

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003112

15528984 - 15549359

20376

ENSAPLT00000045360

15528984 - 15549359

20376

ENSAPLT00000020794

15523751 - 15549359

25609