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Intron Name: Anas_platyrhynchos_platyrhynchos_3_15543619_15546018_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15543619 - 15546018

Intron Length:

2400

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

ATCCTTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TGAAACTCAAAC

Flanking Amino Acid:

CCAFRNLRTEKQNSLLSIFD

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

74.4

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

79.4

0.66

0.9

76.6

36.9

Minor 5ss

36.2

-1.6

2.9

37.7

Minor BPS

46.5

-0.2

1.8

56.41

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003003

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020794

15523751 - 15549359

25609

ENSAPLT00000003112

15528984 - 15549359

20376