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Intron Name: Anas_platyrhynchos_platyrhynchos_3_15555872_15556640_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15555872 - 15556640

Intron Length:

769

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTAAACTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TACTTCTTAAAT

Flanking Amino Acid:

EEPQIDIVEEDPLNSDDDVS

Intron Amino Acid Position:

478

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

80.3

28.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

73.6

0.53

0.9

64.8

41.2

Minor 5ss

40.6

-1.1

2.8

52.6

44.6

Minor BPS

72.9

0.8

1.3

82.08

Associated Gene:

Gene:

GTF2A1L

Ensembl Gene ID:

ENSAPLG00000028188

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018239

15553745 - 15565204

11460