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Intron Name: Anas_platyrhynchos_platyrhynchos_3_15556935_15558410_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15556935 - 15558410

Intron Length:

1476

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGACCT

5'SS Class:

strong_major

3'SS Sequence:

TTATTGTTGTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTTTTATTG

Flanking Amino Acid:

DEDTVAPTDKLEPTEQVESN

Intron Amino Acid Position:

380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

41.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.9

0.61

77.1

41.8

Minor 5ss

33.2

-1.9

3.4

48.6

47.1

Minor BPS

57.3

0.09

1.6

61.8

41.5

Associated Gene:

Gene:

GTF2A1L

Ensembl Gene ID:

ENSAPLG00000028188

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018239

15553745 - 15565204

11460