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Intron Name: Anas_platyrhynchos_platyrhynchos_3_15612106_15612817_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

15612106 - 15612817

Intron Length:

712

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTCTGG

5'SS Class:

weak_major

3'SS Sequence:

TTCTATCCTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

TTAACATGAACT

Flanking Amino Acid:

TESREGLAQQVQQSLEKIAK

Intron Amino Acid Position:

568

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.9

0.45

1.1

55.1

44.5

Major BPS

0.52

1.1

77.7

35.3

Major PPT

71.4

0.48

71.5

33.1

Minor 5ss

49.4

-0

2.5

65.1

46.2

Minor BPS

60.4

0.4

1.8

80.64

Associated Gene:

Gene:

PPP1R21

Ensembl Gene ID:

ENSAPLG00000001162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019027

15604727 - 15629955

25229

ENSAPLT00000001432

15604727 - 15631827

27101