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Intron Name: Anas_platyrhynchos_platyrhynchos_3_15613741_15614088_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15613741 - 15614088

Intron Length:

348

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATGTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTCAACTTAATT

Flanking Amino Acid:

VVSLTNGMGKIASFFSNNLD

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

73.8

32.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.1

0.72

0.9

82.1

34.6

Minor 5ss

36.1

-1.6

3.2

46.7

48.6

Minor BPS

68.4

0.66

1.5

81.74

39.8

Associated Gene:

Gene:

PPP1R21

Ensembl Gene ID:

ENSAPLG00000001162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019027

15604727 - 15629955

25229

ENSAPLT00000001432

15604727 - 15631827

27101