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Intron Name: Anas_platyrhynchos_platyrhynchos_3_15615855_15616418_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15615855 - 15616418

Intron Length:

564

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CATGGTGCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TCCCTTTTGACA

Flanking Amino Acid:

HTYISLLALPSTKPEGLLRT

Intron Amino Acid Position:

412

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

77.6

32.3

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

0.29

58.5

42.8

Minor 5ss

35.7

-1.6

3.2

45.3

36.6

Minor BPS

58.5

0.26

1.2

62.53

38.2

Associated Gene:

Gene:

PPP1R21

Ensembl Gene ID:

ENSAPLG00000001162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019027

15604727 - 15629955

25229

ENSAPLT00000001432

15604727 - 15631827

27101