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Intron Name: Anas_platyrhynchos_platyrhynchos_3_15617309_15617383_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15617309 - 15617383

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TACTTGTTATCT

Flanking Amino Acid:

SITEDTVTVLETAVKLKAFS

Intron Amino Acid Position:

337

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

83.3

29.1

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

87.4

0.84

0.6

Minor 5ss

-0.6

3.2

62.3

43.4

Minor BPS

49.4

0.04

2.3

72.18

44.9

Associated Gene:

Gene:

PPP1R21

Ensembl Gene ID:

ENSAPLG00000001162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019027

15604727 - 15629955

25229

ENSAPLT00000001432

15604727 - 15631827

27101