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Intron Name: Anas_platyrhynchos_platyrhynchos_3_15620706_15622506_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15620706 - 15622506

Intron Length:

1801

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

ACTGTCTTTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

ACTTTTATAACT

Flanking Amino Acid:

NIPLHNRRYQLKLRDLAGQA

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.1

1.13

0.6

93.5

20.3

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

79.6

0.67

0.9

72.5

37.1

Minor 5ss

38.4

-1.3

2.8

52.3

44.3

Minor BPS

63.4

0.5

1.6

78.49

Associated Gene:

Gene:

PPP1R21

Ensembl Gene ID:

ENSAPLG00000001162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019027

15604727 - 15629955

25229

ENSAPLT00000001432

15604727 - 15631827

27101