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Intron Name: Anas_platyrhynchos_platyrhynchos_3_15627390_15628079_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15627390 - 15628079

Intron Length:

690

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTGAGTAAA

5'SS Class:

major

3'SS Sequence:

TTTCTTATTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTTTCTTATTT

Flanking Amino Acid:

IEENERLHILFFEADEQHKR

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

30.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.5

0.82

0.7

26.8

Minor 5ss

32.2

-2

2.7

39.2

40.5

Minor BPS

68.8

0.67

1.6

82.89

39.2

Associated Gene:

Gene:

PPP1R21

Ensembl Gene ID:

ENSAPLG00000001162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019027

15604727 - 15629955

25229

ENSAPLT00000001432

15604727 - 15631827

27101