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Intron Name: Anas_platyrhynchos_platyrhynchos_3_15629875_15631761_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

15629875 - 15631761

Intron Length:

1887

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCCGGGG

5'SS Class:

weak_major

3'SS Sequence:

TTTTTTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TATTCTTGCATA

Flanking Amino Acid:

YQKLAQEYSKLRAQNQVLKK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.4

0.22

1.2

45.9

44.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

100

1.12

0.4

100

Minor 5ss

27.6

-2.6

3.6

37.8

Minor BPS

52.9

0.08

1.9

69.12

37.5

Associated Gene:

Gene:

PPP1R21

Ensembl Gene ID:

ENSAPLG00000001162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001432

15604727 - 15631827

27101