Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_15735507_15742843_R

Intron Information:

Intron Rank:

148105

Intron Class:

major

Intron Phase:

Intron Coordinates:

15735507 - 15742843

Intron Length:

7337

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGTGTTAT

5'SS Class:

major

3'SS Sequence:

CTTTTCTCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTATAT

U12 Branch Point Sequence:

GTTTCCTCAGCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

0.9

74.5

31.1

Major BPS

66.9

0.42

1.1

64.7

41.3

Major PPT

84.9

0.79

0.7

80.1

25.5

Minor 5ss

42.7

-0.8

2.8

54.1

45.6

Minor BPS

66.7

0.6

1.8

85.65

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040519

15734458 - 15742965

8508