Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_15811502_15811599_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15811502 - 15811599

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTCTG

5'SS Class:

major

3'SS Sequence:

ACTTCAATTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTTCCACACTT

Flanking Amino Acid:

QNGGILVYNSGLGFIEDNEI

Intron Amino Acid Position:

658

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

65.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

64.1

0.32

1.1

65.9

38.4

Minor 5ss

36.6

-1.5

3.3

46.2

43.5

Minor BPS

0.17

2.1

81.26

40.6

Associated Gene:

Gene:

FBXO11

Ensembl Gene ID:

ENSAPLG00000016215

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016942

15744064 - 15816998

72935