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Intron Name: Anas_platyrhynchos_platyrhynchos_3_15818880_15820063_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15818880 - 15820063

Intron Length:

1184

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTTCTTTTAAAG

Flanking Amino Acid:

RLGASDRIMSGESTFFVELS

Intron Amino Acid Position:

1288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.4

1.02

0.7

87.4

21.4

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

77.7

0.62

78.4

33.9

Minor 5ss

39.3

-1.2

2.9

45.2

Minor BPS

65.1

0.33

1.4

69.62

37.6

Associated Gene:

Gene:

MSH6

Ensembl Gene ID:

ENSAPLG00000016015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016711

15817001 - 15829507

12507