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Intron Name: Anas_platyrhynchos_platyrhynchos_3_15820182_15820786_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15820182 - 15820786

Intron Length:

605

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TAATTTTTATTT

Flanking Amino Acid:

MGGKSTLMRQAGLLVIMAQL

Intron Amino Acid Position:

1249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

77.6

30.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

92.9

0.96

0.7

88.5

28.1

Minor 5ss

31.9

-2.1

3.3

43.5

44.2

Minor BPS

59.6

0.38

1.5

73.17

38.2

Associated Gene:

Gene:

MSH6

Ensembl Gene ID:

ENSAPLG00000016015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016711

15817001 - 15829507

12507