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Intron Name: Anas_platyrhynchos_platyrhynchos_3_15828585_15828953_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15828585 - 15828953

Intron Length:

369

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

CTTGTCCTTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

TGCTCATTAACC

Flanking Amino Acid:

EKGRRHGAAAGPSCDYSPGD

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

45.2

Major BPS

79.7

0.74

79.6

35.6

Major PPT

79.2

0.66

0.8

73.7

31.3

Minor 5ss

29.9

-2.3

3.2

29.1

43.5

Minor BPS

70.8

0.63

1.6

76.59

39.2

Associated Gene:

Gene:

MSH6

Ensembl Gene ID:

ENSAPLG00000016015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016711

15817001 - 15829507

12507