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Intron Name: Anas_platyrhynchos_platyrhynchos_3_15907934_15923031_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15907934 - 15923031

Intron Length:

15098

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGCGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTCACACCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

TTTATCTTCACA

Flanking Amino Acid:

YFVGTVVSTIGFGMTTPATV

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.1

34.7

Major BPS

0.52

1.1

77.7

35.3

Major PPT

66.5

0.37

0.8

63.4

32.4

Minor 5ss

31.2

-2.2

3.2

38.8

46.5

Minor BPS

66.3

0.51

1.8

79.58

36.6

Associated Gene:

Gene:

KCNK12

Ensembl Gene ID:

ENSAPLG00000011603

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045566

15907120 - 15923927

16808

ENSAPLT00000012068

15905416 - 15923927

18512