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Intron Name: Anas_platyrhynchos_platyrhynchos_3_15947668_15949436_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15947668 - 15949436

Intron Length:

1769

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTGCCAA

5'SS Class:

major

3'SS Sequence:

CACTCCATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTCCAT

U12 Branch Point Sequence:

TTCCCCTCACTC

Flanking Amino Acid:

PSKKVYREREEGEKIIQDFL

Intron Amino Acid Position:

884

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.9

0.42

1.2

58.9

41.6

Major BPS

55.9

0.15

1.3

66.4

39.9

Major PPT

0.45

0.8

66.6

33.8

Minor 5ss

39.6

-1.2

2.8

47.8

47.7

Minor BPS

50.1

-0

1.8

63.85

42.1

Associated Gene:

Gene:

MSH2

Ensembl Gene ID:

ENSAPLG00000015347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016081

15947497 - 15980899

33403