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Intron Name: Anas_platyrhynchos_platyrhynchos_3_15949610_15951216_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15949610 - 15951216

Intron Length:

1607

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACTG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCAACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

TTTCTCTCAACC

Flanking Amino Acid:

TLTMLYRVKAGVCDQSFGIH

Intron Amino Acid Position:

826

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.5

40.6

Major BPS

0.6

65.6

41.1

Major PPT

70.7

0.47

0.9

62.8

37.4

Minor 5ss

35.6

-1.6

3.2

47.4

Minor BPS

0.61

1.5

80.1

34.3

Associated Gene:

Gene:

MSH2

Ensembl Gene ID:

ENSAPLG00000015347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016081

15947497 - 15980899

33403