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Intron Name: Anas_platyrhynchos_platyrhynchos_3_15960728_15963444_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15960728 - 15963444

Intron Length:

2717

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAC

U12 Branch Point Sequence:

AACCCTACAATT

Flanking Amino Acid:

MIETTLDMDKVENHEFLVKA

Intron Amino Acid Position:

469

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

71.4

37.4

Major BPS

70.1

0.5

70.3

31.9

Major PPT

81.1

0.7

74.7

30.6

Minor 5ss

30.8

-2.2

3.8

47.7

Minor BPS

45.2

-0.2

1.7

58.36

38.6

Associated Gene:

Gene:

MSH2

Ensembl Gene ID:

ENSAPLG00000015347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016081

15947497 - 15980899

33403