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Intron Name: Anas_platyrhynchos_platyrhynchos_3_15964561_15975921_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15964561 - 15975921

Intron Length:

11361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGTG

5'SS Class:

strong_major

3'SS Sequence:

AAATCTTATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTTAT

U12 Branch Point Sequence:

TTGTTATGAAAT

Flanking Amino Acid:

PLMDKNRIEERLNLVEAFVV

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

70.2

40.4

Major BPS

82.6

0.81

0.8

71.7

Major PPT

66.2

0.36

63.7

Minor 5ss

32.2

-2

3.7

45.9

49.3

Minor BPS

0.17

1.8

75.24

40.9

Associated Gene:

Gene:

MSH2

Ensembl Gene ID:

ENSAPLG00000015347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016081

15947497 - 15980899

33403