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Intron Name: Anas_platyrhynchos_platyrhynchos_3_15979132_15979487_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15979132 - 15979487

Intron Length:

356

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAATTT

5'SS Class:

major

3'SS Sequence:

TTTCTCTAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAA

U12 Branch Point Sequence:

TTTCTCTAAACA

Flanking Amino Acid:

KENDWYLAYKGSPGNLAQFE

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

75.1

35.7

Major BPS

78.4

0.71

0.9

81.3

29.8

Major PPT

77.2

0.61

0.9

74.2

34.3

Minor 5ss

42.2

-0.9

3.5

64.9

46.4

Minor BPS

68.7

0.58

1.6

80.35

35.4

Associated Gene:

Gene:

MSH2

Ensembl Gene ID:

ENSAPLG00000015347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016081

15947497 - 15980899

33403