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Intron Name: Anas_platyrhynchos_platyrhynchos_3_15991822_15992450_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15991822 - 15992450

Intron Length:

629

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTGAGTACA

5'SS Class:

major

3'SS Sequence:

TGGTTATTTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TTCTGGTTATTT

Flanking Amino Acid:

GSGITVNCNTLTSKCLLMKA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.3

69.4

36.6

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

76.6

0.6

0.9

74.4

40.4

Minor 5ss

32.1

-2

2.6

35.4

34.5

Minor BPS

45.7

-0.2

2.5

70.91

46.7

Associated Gene:

Gene:

EPCAM

Ensembl Gene ID:

ENSAPLG00000015136

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015788

15988240 - 15993069

4830