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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16007585_16007624_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16007585 - 16007624

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTATGACAT

5'SS Class:

major

3'SS Sequence:

AAAAAAAATGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

GCTTTGGGAAAA

Flanking Amino Acid:

NTVEEDDEESKKLFPDFLKL

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

67.1

38.1

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

40.9

-0.5

1.7

30.9

39.6

Minor 5ss

41.4

-1

3.1

56.7

41.9

Minor BPS

37.3

-0.9

2.5

49.4

41.4

Associated Gene:

Gene:

SPDYA

Ensembl Gene ID:

ENSAPLG00000015043

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015667

16004644 - 16010447

5804