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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16010723_16010862_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16010723 - 16010862

Intron Length:

140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACAG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCAACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

CTGTTTTCAACC

Flanking Amino Acid:

RPSNWQDAHSAFLTKLRKFR

Intron Amino Acid Position:

619

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

67.7

39.3

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

73.6

0.53

67.8

42.7

Minor 5ss

25.9

-2.8

2.9

29.3

43.4

Minor BPS

58.6

0.25

1.6

65.45

40.9

Associated Gene:

Gene:

TRMT61B

Ensembl Gene ID:

ENSAPLG00000023240

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044723

16010679 - 16017112

6434

ENSAPLT00000019296

16010679 - 16017167

6489