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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16012315_16013296_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16012315 - 16013296

Intron Length:

982

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTGCA

5'SS Class:

major

3'SS Sequence:

CTTTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TGTTATGGAAAA

Flanking Amino Acid:

EDMKSVTFDAITLDMISPQS

Intron Amino Acid Position:

473

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

69.1

35.7

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

89.5

0.89

0.6

84.5

23.2

Minor 5ss

35.2

-1.7

3.2

47.2

42.3

Minor BPS

43.1

-0.5

2.2

59.41

39.9

Associated Gene:

Gene:

TRMT61B

Ensembl Gene ID:

ENSAPLG00000023240

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044723

16010679 - 16017112

6434

ENSAPLT00000019296

16010679 - 16017167

6489