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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16016046_16016134_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16016046 - 16016134

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCCCGGG

5'SS Class:

weak_major

3'SS Sequence:

TCCCCCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTAAC

U12 Branch Point Sequence:

GAGCTGGTAACG

Flanking Amino Acid:

PRGPAIAYPKDISAMLMMMD

Intron Amino Acid Position:

327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.9

0.21

1.2

45.2

44.9

Major BPS

59.3

0.23

1.3

61.4

43.2

Major PPT

71.5

0.48

0.7

65.1

23.5

Minor 5ss

34.8

-1.7

3.5

46.9

48.5

Minor BPS

38.8

-0.9

2.4

42.03

42.7

Associated Gene:

Gene:

TRMT61B

Ensembl Gene ID:

ENSAPLG00000023240

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044723

16010679 - 16017112

6434